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OneLab: Protocol design
OneLab: Protocol design
This collection contains several sections with articles about how to design protocols in OneLab
44 articles in this collection
Written by
Guillaume Mignard,
Nikolas Vamvoukas,
and
Alexis Gachet
Protocol designer
What is the OneLab protocol designer?
This article gives information about the OneLab protocol designer.
Written by
Nikolas Vamvoukas
Updated over a week ago
How to change general protocol parameters ("Edit protocol")
This article describes how to change the general protocol parameters.
Written by
Nikolas Vamvoukas
Updated over a week ago
Designing a new protocol
This article describes how to design a new protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
Saving your protocols online and/or locally
This article describes how to save your protocols.
Written by
Nikolas Vamvoukas
Updated over a week ago
Opening and working on an existing online protocol
This article describes how to open an existing protocol and edit it.
Written by
Nikolas Vamvoukas
Updated over a week ago
Importing your protocols from local copies.
This article describes how your protocols can be imported when you obtain a .onp file.
Written by
Nikolas Vamvoukas
Updated over a week ago
Equipment and materials in your lab
Devices, tools, accessories and labware.
This article describes the different categories of equipment defined in OneLab.
Written by
Nikolas Vamvoukas
Updated over a week ago
Adding labware to the virtual bench
This article describes how to add labware to the virtual bench.
Written by
Nikolas Vamvoukas
Updated over a week ago
What types of labware are available in OneLab?
This articles describes what main types/categories of consumables are included in the OneLab environment.
Written by
Nikolas Vamvoukas
Updated over a week ago
The labware contextual menu
This article describes what options you have in the contextual menu that is available for each of the labware placed on the virtual bench.
Written by
Nikolas Vamvoukas
Updated over a week ago
Samples and reagents
Enabling 🏷️ Sample tracking in your experiments
Configure your protocol to take advantage of the sample tracking in OneLab
Written by
Guillaume Mignard
Updated over a week ago
Fill a labware with a reagent
This article describes how to fill a labware with a reagent.
Written by
Nikolas Vamvoukas
Updated over a week ago
What are reagents?
This article describes what reagents are in OneLab.
Written by
Nikolas Vamvoukas
Updated over a week ago
Create a new reagent
This article describes how to define a new reagent in OneLab.
Written by
Nikolas Vamvoukas
Updated over a week ago
Create bulk solutions at start (reagents or sample reference)
Import solutions at start information from an external source and define rapidly the starting setup of the protocol
Written by
Alexis Gachet
Updated over a week ago
Pipetting actions / Protocol steps
Single pipetting action
This article describes how to add a single pipetting step to your protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
Concentration normalization
This article describes how to add a concentration normalization step to your protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
Serial dilution
This article describes how to add a serial dilution step to your protocol.
Written by
Alexis Gachet
Updated over a week ago
Serial dilution examples
This article has 3 examples of creating serial dilutions in Onelab
Written by
Alexis Gachet
Updated over a week ago
Centrifugation
This article describes how to add a step to your protocol where a centrifugal motion is generated in your sample.
Written by
Nikolas Vamvoukas
Updated over a week ago
Apply magnetic field
This article describes how to add a step to your protocol where a magnetic field is applied to your sample.
Written by
Nikolas Vamvoukas
Updated over a week ago
Vortexing
This article describes how to add a step to your protocol where a vortex is generated in your sample.
Written by
Nikolas Vamvoukas
Updated over a week ago
Shaking
This article describes how to add a step to your protocol where your sample is shaken.
Written by
Nikolas Vamvoukas
Updated over a week ago
Heat/Cool
This article describes how to add a step to your protocol where your sample is heated or cooled.
Written by
Nikolas Vamvoukas
Updated over a week ago
Waiting (incubation period)
This article describes how to add an incubation period / waiting step to your protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
User action / notification
This article describes how to add a user action or notification to your protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
Advanced protocol design
Hosting 🎥 videos or 📷 images for your protocol step guidelines (multiple solutions)
How to host multimedia resources for your protocol step additional guidelines.
Written by
Guillaume Mignard
Updated over a week ago
Selection of labware locations by importing information from an external source
This article describes how to import labware location data from an external source (Excel, LIMS, etc.).
Written by
Nikolas Vamvoukas
Updated over a week ago
Define volumes by importing information from an external source
This article describes how to import volume data from an external source (Excel, LIMS, etc.).
Written by
Nikolas Vamvoukas
Updated over a week ago
Selecting sources and/or destinations on a labware with multiple locations manually
This article describes how to select sources and/or destinations on a labware with multiple locations like a microplate.
Written by
Nikolas Vamvoukas
Updated over a week ago
Nesting protocol steps
This article explains how to nest several protocol steps, such that several actions can be executed simultaneously.
Written by
Nikolas Vamvoukas
Updated over a week ago
Pipetting menu parameters
Pipetting menu
This article presents the options available while designing a pipetting action.
Written by
Nikolas Vamvoukas
Updated over a week ago
Configuration: Multi-volume mode
This article describes how to add a multi-volume pipetting step to your protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
Advanced: Pipetting
This article describes the pipetting options present in the Advanced section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Advanced: Handling liquid viscosity
This article describes the options present in the Advanced section of the Pipetting menu for handling liquids with different viscosity.
Written by
Nikolas Vamvoukas
Updated over a week ago
Advanced: Tip position
This article describes the tip positioning options present in the Advanced section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Advanced: Tip choice
This article describes the tip choice options present in the Advanced section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Advanced: Mixing
This article describes the mixing options present in the Advanced section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Automation: Custom tip position
This article describes the customization option of the tip position present in the Automation section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Automation: Tip geometry control
This article describes the control of the tip geometry option present in the Automation section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Guidelines
This article describes the guideline field present in the Guidelines section of the Pipetting menu.
Written by
Nikolas Vamvoukas
Updated over a week ago
Information handling
Missing reagent in a source labware
This article explains how you have to deal with the situation where the source labware does not contain a reagent yet.
Written by
Nikolas Vamvoukas
Updated over a week ago
Check volumes and concentrations
This article describes how to check the volumes and concentrations present in each of your consumables, during any step of your protocol.
Written by
Nikolas Vamvoukas
Updated over a week ago
Check labware information
This article describes how to check additional information about the consumable on the virtual bench: "View labware info".
Written by
Nikolas Vamvoukas
Updated over a week ago